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Submit a long-read analysis tool
Name:
DOI(s):
Platform(s):
Description:
Code:
License:
Underlying algorithms:
Underlying assumptions:
Strengths & weaknesses:
Overall performance:
Technology{ies):
Oxford Nanopore
PacBio
Bionano Genomics
10X Genomics
Hi-C
Other
Categories:
Alignment
Analysis Pipelines
Base Calling
Base Modification Detection
Data Structures
Demultiplexing
De novo
Assembly
Error Correction And/Or Polishing
Evaluating Exisiting Methods
Gap Filling in Assemblies
Generating Consensus Sequence
Isoform Detection
Long-Read Overlapping
Metagenomics
Normalisation
polyA Length Estimation
Provide Summary Statistics
Quality Checking
Quality Filtering
Quality Trimming
Read Quantification
RNA Structure
Scaffolding
Simulators
SNP And/Or Variant Analysis
Suited For Single-Cell Experiments
Taxonomic Classification
Tested On Human Data
Tested On Non-Human Data
Transcriptomics
Visualisation
Other
Notes:
Email:
Submit
Submit a benchmark-style article
Title:
Authors (*add comma separated list):
Year:
Journal:
Issue:
Volume:
Abstract
DOI:
Technology{ies):
Oxford Nanopore
PacBio
Bionano Genomics
10X Genomics
Hi-C
Other
Technology(ies):
Oxford Nanopore
PacBio
Bionano Genomics
10X Genomics
Hi-C
Other
Categories:
Alignment
Analysis Pipelines
Base Calling
Base Modification Detection
Data Structures
Demultiplexing
De novo
Assembly
Error Correction And/Or Polishing
Evaluating Exisiting Methods
Gap Filling in Assemblies
Generating Consensus Sequence
Isoform Detection
Long-Read Overlapping
Metagenomics
Normalisation
polyA Length Estimation
Provide Summary Statistics
Quality Checking
Quality Filtering
Quality Trimming
Read Quantification
RNA Structure
Scaffolding
Simulators
SNP And/Or Variant Analysis
Suited For Single-Cell Experiments
Taxonomic Classification
Tested On Human Data
Tested On Non-Human Data
Transcriptomics
Visualisation
Other
Tools compared(comma separated):
Benchmark data:
Recommendation summary:
Notes:
Email:
Submit
Submit a tutorial workflow
Workflow Name:
Description:
Links_to_the_workflow_source:
References (DOI links, optional):
Technology{ies):
Oxford Nanopore
PacBio
Bionano Genomics
10X Genomics
Hi-C
Other
Workflow step 1
Categories:
Alignment
Analysis Pipelines
Base Calling
Base Modification Detection
Data Structures
Demultiplexing
De novo
Assembly
Error Correction And/Or Polishing
Evaluating Exisiting Methods
Gap Filling in Assemblies
Generating Consensus Sequence
Isoform Detection
Long-Read Overlapping
Metagenomics
Normalisation
polyA Length Estimation
Provide Summary Statistics
Quality Checking
Quality Filtering
Quality Trimming
Read Quantification
RNA Structure
Scaffolding
Simulators
SNP And/Or Variant Analysis
Suited For Single-Cell Experiments
Taxonomic Classification
Tested On Human Data
Tested On Non-Human Data
Transcriptomics
Visualisation
Other
Suggested tool/s (if multiple tools, separate by comma):
Add New Step
Reset Steps
Notes:
Email:
Submit